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Fast Inference of Individual Admixture Coefficients Using Geographic Data

Kevin Caye , Flora Jay , Olivier J.J. Michel , Olivier François
Annals of Applied Statistics, 2018, 12 (1), pp.586-608. ⟨10.1214/17-AOAS1106⟩
Journal articles hal-01676712v1
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On the robustness of the generalized fused lasso to prior specifications

Vivian Viallon , Sophie Lambert-Lacroix , Holger Höfling , Franck Picard
Statistics and Computing, 2016, 26 (1), pp.285-301. ⟨10.1007/s11222-014-9497-6⟩
Journal articles hal-01067903v2
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Loter: A software package to infer local ancestry for a wide range of species

Thomas Dias-Alves , Julien Mairal , Michael Blum
Molecular Biology and Evolution, 2018, 35 (9), pp.2318 - 2326. ⟨10.1093/molbev/msy126⟩
Journal articles hal-01630228v3
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La prise de fonction, dispositif pédagogique pour partager les expériences

Pierre-Philippe Dujardin , Sandrine Monastiri , Cédric Sarreboubée , Fabienne Rouchouze
Soins Cadres, 2018, 27 (105), pp.24-26. ⟨10.1016/j.scad.2017.12.006⟩
Journal articles hal-01817331v1
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Comités de Retour d'Expérience et culture de sécurité des soins

Bastien Boussat
Médecine humaine et pathologie. Université Grenoble Alpes, 2018. Français. ⟨NNT : 2018GREAS008⟩
Theses tel-02382764v1
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Rouse model with transient intramolecular contacts on a timescale of seconds recapitulates folding and fluctuation of yeast chromosomes

Marius Socol , Renjie Wang , Daniel Jost , Pascal Carrivain , Cédric Vaillant , et al.
Nucleic Acids Research, 2019, 47 (12), pp.6195-6207. ⟨10.1093/nar/gkz374⟩
Journal articles hal-02276944v1
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Cross-cultural adaptation of the 4-Habits Coding Scheme into French to assess physician communication skills

Alexandre Bellier , Philippe Chaffanjon , Edward Krupat , Patrice François , José Labarère
PLoS ONE, 2020, 15 (4), pp.e0230672. ⟨10.1371/journal.pone.0230672⟩
Journal articles inserm-02555785v1
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Intracellular Positioning Systems Limit the Entropic Eviction of Secondary Replicons Toward the Nucleoid Edges in Bacterial Cells

Julie Dauverd -Girault , Charlène Planchenault , Marine Pons , Caroline Schiavon , Patricia Siguier , et al.
Journal of Molecular Biology, 2020, 432 (3), pp.745-761. ⟨10.1016/j.jmb.2019.11.027⟩
Journal articles hal-02392007v1
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Double reading of outsourced CT/MR radiology reports

Jean-François Vendrell , Julien Frandon , Bastien Boussat , François Cotton , Gilbert R. Ferretti , et al.
Journal of Patient Safety, In press, ⟨10.1097/PTS.0000000000000525⟩
Journal articles hal-02063156v1
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At the Origin of a Worldwide Invasion: Unraveling the Genetic Makeup of the Caribbean Bridgehead Populations of the Dengue Vector Aedes aegypti

Stéphanie Sherpa , Delphine Rioux , Daniella Goindin , Florence Fouque , Olivier François , et al.
Genome Biology and Evolution, 2018, 10 (1), pp.56-71. ⟨10.1093/gbe/evx267⟩
Journal articles hal-01996523v1
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Characteristics of morbidity and mortality conferences associated with the implementation of patient safety improvement initiatives, an observational study

Patrice François , Frédéric Prate , Gwenaëlle Vidal-Trecan , Jean-François Quaranta , Jose Labarere , et al.
BMC Health Services Research, 2016, 16, pp.35. ⟨10.1186/s12913-016-1279-8⟩
Journal articles inserm-02072789v1
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PATL2 is a key actor of oocyte maturation whose invalidation causes infertility in women and mice

Marie Christou‐kent , Zine‐eddine Kherraf , Amir Amiri‐yekta , Emilie Le Blévec , Thomas Karaouzène , et al.
EMBO Molecular Medicine, 2018, 10 (5), pp.e8515. ⟨10.15252/emmm.201708515⟩
Journal articles hal-01877992v1
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TADs are 3D structural units of higher-order chromosome organization in Drosophila

Quentin Szabo , Daniel Jost , Jia-Ming Chang , Diego Cattoni , Giorgio Papadopoulos , et al.
Science Advances , 2018, 4 (2), pp.eaar8082. ⟨10.1126/sciadv.aar8082⟩
Journal articles hal-01726709v1
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Biallelic variants in MAATS1 encoding CFAP91, a calmodulin-associated and spoke-associated complex protein, cause severe astheno-teratozoospermia and male infertility

Guillaume Martinez , Julie Beurois , Denis Dacheux , Caroline Cazin , Marie Bidart , et al.
Journal of Medical Genetics, 2020, 57 (10), pp.708-716. ⟨10.1136/jmedgenet-2019-106775⟩
Journal articles hal-03004959v1
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Conditional fractional Gaussian fields with the package FieldSim

Alexandre Brouste , Jacques Istas , Sophie Lambert-Lacroix
The R Journal, 2016, 8 (1), pp.38-47
Journal articles hal-02271831v1
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Genetic risk score based on statistical learning

Florian Privé
Bioinformatics [q-bio.QM]. Université Grenoble Alpes, 2019. English. ⟨NNT : 2019GREAS024⟩
Theses tel-02476202v1
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Probabilistic Count Matrix Factorization for Single Cell Expression Data Analysis

Ghislain Durif , Laurent Modolo , Jeff E Mold , Sophie Lambert-Lacroix , Franck Picard
Bioinformatics, 2019, 35, 20, pp.4011-4019. ⟨10.1093/bioinformatics/btz177⟩
Journal articles hal-01649275v3
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Five-Year Trends in Multifocal Electroretinogram for Patients With Birdshot Chorioretinopathy

Adriane Mailhac , Jose Labarere , Florent Aptel , Sylvie Berthemy , Laurence Bouillet , et al.
American Journal of Ophthalmology, 2019, 200, pp.138-149. ⟨10.1016/j.ajo.2018.11.022⟩
Journal articles hal-02272296v1
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Application de l'Analyse en Composantes Principales pour étudier l'adaptation biologique en génomique des populations

Keurcien Luu
Bio-informatique [q-bio.QM]. Université Grenoble Alpes, 2017. Français. ⟨NNT : 2017GREAS053⟩
Theses tel-01758156v1
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A Methodology for Evaluating the Extensibility of Boolean Networks’ Structure and Function

Rémi Segretain , Sergiu Ivanov , Laurent Trilling , Nicolas Glade
9th International Conference on Complex Networks and their Applications (COMPLEX NETWORKS 2020), Dec 2020, Madrid, Spain. pp.372-385, ⟨10.1007/978-3-030-65351-4_30⟩
Conference papers hal-03168800v1
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PenDA, a rank-based method for personalized differential analysis: Application to lung cancer

Magali Richard , Clémentine Decamps , Florent Chuffart , Elisabeth Brambilla , Sophie Rousseaux , et al.
PLoS Computational Biology, 2020, 16 (5), pp.e1007869. ⟨10.1371/journal.pcbi.1007869⟩
Journal articles inserm-02868566v1
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Assigning function to natural allelic variation via dynamic modeling of gene network induction

Magali Richard , Florent Chuffart , Hélène Duplus‐bottin , Fanny Pouyet , Martin Spichty , et al.
Molecular Systems Biology, 2018, 14 (1), pp.e7803. ⟨10.15252/msb.20177803⟩
Journal articles hal-01976613v1
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Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software

Clémentine Decamps , Florian Privé , Raphael Bacher , Daniel Jost , Arthur Waguet , et al.
BMC Bioinformatics, 2020, 21 (1), ⟨10.1186/s12859-019-3307-2⟩
Journal articles hal-03012777v1
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Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software

Clémentine Decamps , Florian Privé , Raphael Bacher , Daniel Jost , Arthur Waguet , et al.
BMC Bioinformatics, 2020, 21 (1), ⟨10.1186/s12859-019-3307-2⟩
Journal articles hal-02997889v1
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CRELD1 is an evolutionarily-conserved maturational enhancer of ionotropic acetylcholine receptors

Manuela d'Alessandro , Magali Richard , Christian Stigloher , Vincent Gache , Thomas Boulin , et al.
Journal articles hal-02009626v1
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Molecular basis of African yam domestication: analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes

Roland Akakpo , Nora Scarcelli , Hana Chaïr , Alexandre Dansi , Gustave Djedatin , et al.
BMC Genomics, 2017, 18 (1), ⟨10.1186/s12864-017-4143-2⟩
Journal articles hal-01814687v1
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Systems Biology, Systems Medicine, Systems Pharmacology: The What and The Why

Angélique Stéphanou , Eric Fanchon , Pasquale Innominato , Annabelle Ballesta
Acta Biotheoretica, 2018, 66 (4), pp.345-365. ⟨10.1007/s10441-018-9330-2⟩
Journal articles hal-01975961v1
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MatrixDB: integration of new data with a focus on glycosaminoglycan interactions

Olivier Clerc , Madeline Deniaud , Sylvain Vallet , Alexandra Naba , Alain Rivet , et al.
Nucleic Acids Research, 2019, 47 (D1), pp.D376-D381. ⟨10.1093/nar/gky1035⟩
Journal articles hal-02109904v1
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Quelles compétences et ressources pour les cadres de santé dans la gestion des situations à forte charge émotionnelle ?

Pierre-Philippe Dujardin , Valérie Lépine
Santé Publique, 2018, 30 (4), pp.507-516. ⟨10.3917/spub.185.0507⟩
Journal articles hal-01959290v1
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Detecting Genomic Signatures of Natural Selection with Principal Component Analysis: Application to the 1000 Genomes Data.

Nicolas Duforet-Frebourg , Keurcien Luu , Guillaume Laval , Eric Bazin , Michael G B Blum
Molecular Biology and Evolution, 2015, ⟨10.1093/molbev/msv334⟩
Journal articles hal-01280469v1